by Piter Boll in Earthling Nature
by Piter Kehoma Boll If you are walking through a forest in Europe you may find the bark of some trees covered by a thin rosy or orange crust. Commonly known as rosy crust, its scientific name is Peniophora incarnata. As … Continue reading →... Read more »
Lee, H., Yun, S., Jang, S., Kim, G., & Kim, J. (2015) Bioremediation of Polycyclic Aromatic Hydrocarbons in Creosote-Contaminated Soil by Peniophora incarnata KUC8836. Bioremediation Journal, 19(1), 1-8. DOI: 10.1080/10889868.2014.939136
Suay, I., Arenal, F,, Asensio, F. J., Basilio, A., Cabello, M. A., Díez, M. T., García, J. B., González del Val, A., Gorrochategui, J., Hernández, P.... (2000) Screening of basidiomycetes for antimicrobial activities. Antonie van Leeuwenhoek, 78(2), 129-140. DOI: 10.1023/A:1026552024021
by Piter Boll in Earthling Nature
by Piter Kehoma Boll It’s more than time to bring a fern as a Friday Fellow, and I decided to start with one of my favorites, the Neotropical tree fern Dicksonia sellowiana, known in Brazil as Samambaiaçu or Xaxim. The samambaiaçu … Continue reading →... Read more »
Schmitt, J., Schneider, P., & Windisch, P. (2009) Crescimento do cáudice e fenologia de Dicksonia sellowiana Hook. (Dicksoniaceae) no sul do Brasil. Acta Botanica Brasilica, 23(1), 283-291. DOI: 10.1590/S0102-33062009000100030
by gdw in FictionalFieldwork
March of the mammoths Improvements in our genetic tinkering capabilities have led several people to suggest potential uses for our newfound powers. Although we ought to add some nuance and note that those powers are still in development. In any case, one of those powers is quite impressive. De-extinction, or the process of bringing back […]... Read more »
Seddon PJ, Griffiths CJ, Soorae PS, & Armstrong DP. (2014) Reversing defaunation: restoring species in a changing world. Science, 345(6195), 406-12. PMID: 25061203
McCauley, D., Hardesty-Moore, M., Halpern, B., & Young, H. (2016) A mammoth undertaking: harnessing insight from functional ecology to shape de-extinction priority setting. Functional Ecology. DOI: 10.1111/1365-2435.12728
by Piter Boll in Earthling Nature
by Piter Kehoma Boll Certainly the most widespread, adaptable and well-known honey-producing bee is Apis melifera, commonly known as honeybee for obvious reasons. But there are a lot of other honey makers all over the world. Today I’m going to present … Continue reading →... Read more »
Miorin, P., Levy Junior, N., Custodio, A., Bretz, W., & Marcucci, M. (2003) Antibacterial activity of honey and propolis from Apis mellifera and Tetragonisca angustula against Staphylococcus aureus. Journal of Applied Microbiology, 95(5), 913-920. DOI: 10.1046/j.1365-2672.2003.02050.x
Sawaya, A., Cunha, I., Marcucci, M., de Oliveira Rodrigues, R., & Eberlin, M. (2006) Brazilian Propolis of Tetragonisca angustula and Apis mellifera. Apidologie, 37(3), 398-407. DOI: 10.1051/apido:2006011
by Piter Boll in Earthling Nature
by Piter Kehoma Boll What if the cure for cancer has been living in your garden all this time and you have been trying to get rid of it because it is an annoying weed? I cannot assure you that … Continue reading →... Read more »
Brandão, M., Krettli, A., Soares, L., Nery, C., & Marinuzzi, H. (1997) Antimalarial activity of extracts and fractions from Bidens pilosa and other Bidens species (Asteraceae) correlated with the presence of acetylene and flavonoid compounds. Journal of Ethnopharmacology, 57(2), 131-138. DOI: 10.1016/S0378-8741(97)00060-3
Chang, J., Chiang, L., Chen, C., Liu, L., Wang, K., & Lin, C. (2001) Antileukemic Activity of Bidens pilosa L. var. minor (Blume) Sherff and Houttuynia cordata Thunb. The American Journal of Chinese Medicine, 29(02), 303-312. DOI: 10.1142/S0192415X01000320
Chiang, L., Chang, J., Chen, C., Ng, L., & Lin, C. (2003) Anti-Herpes Simplex Virus Activity of Bidens pilosa and Houttuynia cordata. The American Journal of Chinese Medicine, 31(03), 355-362. DOI: 10.1142/S0192415X03001090
Deba, F., Xuan, T., Yasuda, M., & Tawata, S. (2008) Chemical composition and antioxidant, antibacterial and antifungal activities of the essential oils from Bidens pilosa Linn. var. Radiata. Food Control, 19(4), 346-352. DOI: 10.1016/j.foodcont.2007.04.011
Kviecinski, M., Felipe, K., Schoenfelder, T., de Lemos Wiese, L., Rossi, M., Gonçalez, E., Felicio, J., Filho, D., & Pedrosa, R. (2008) Study of the antitumor potential of Bidens pilosa (Asteraceae) used in Brazilian folk medicine. Journal of Ethnopharmacology, 117(1), 69-75. DOI: 10.1016/j.jep.2008.01.017
Oliveira, F., Andrade-Neto, V., Krettli, A., & Brandão, M. (2004) New evidences of antimalarial activity of Bidens pilosa roots extract correlated with polyacetylene and flavonoids. Journal of Ethnopharmacology, 93(1), 39-42. DOI: 10.1016/j.jep.2004.03.026
Pereira, R., Ibrahim, T., Lucchetti, L., da Silva, A., & de Moraes, V. (1999) Immunosuppressive and anti-inflammatory effects of methanolic extract and the polyacetylene isolated from Bidens pilosa L. Immunopharmacology, 43(1), 31-37. DOI: 10.1016/S0162-3109(99)00039-9
Sun, Y., Zhou, Q., Wang, L., & Liu, W. (2009) Cadmium tolerance and accumulation characteristics of Bidens pilosa L. as a potential Cd-hyperaccumulator. Journal of Hazardous Materials, 161(2-3), 808-814. DOI: 10.1016/j.jhazmat.2008.04.030
by gdw in FictionalFieldwork
Mohi looks up at her mother. Confused. Afraid. Mother had always said that she had to keep her filtration veil on when they left their housedome. But now, here stood her mother, unveiled. The woman gifted an encouraging nod to her young daughter. Mohi removed her veil. Air! Light! The freshness of the breeze and […]... Read more »
Steffen W, Richardson K, Rockström J, Cornell SE, Fetzer I, Bennett EM, Biggs R, Carpenter SR, de Vries W, de Wit CA.... (2015) Sustainability. Planetary boundaries: guiding human development on a changing planet. Science, 347(6223). PMID: 25592418
Newbold T, Hudson LN, Arnell AP, Contu S, De Palma A, Ferrier S, Hill SL, Hoskins AJ, Lysenko I, Phillips HR.... (2016) Has land use pushed terrestrial biodiversity beyond the planetary boundary? A global assessment. Science, 353(6296), 288-91. PMID: 27418509
Oliver TH. (2016) How much biodiversity loss is too much?. Science, 353(6296), 220-1. PMID: 27418489
This week’s Video Tip of the Week is actually a whole bunch of videos. Although I’ll highlight one here as our tip, there are many great talks from the recent JGI Genomics of Energy & Environment meeting. Although typically we focus on specific software tools for our tips, I think this is a nice case […]... Read more »
Afshinnekoo, E., Meydan, C., Chowdhury, S., Jaroudi, D., Boyer, C., Bernstein, N., Maritz, J., Reeves, D., Gandara, J., Chhangawala, S.... (2015) Geospatial Resolution of Human and Bacterial Diversity with City-Scale Metagenomics. Cell Systems, 1(1), 72-87. DOI: 10.1016/j.cels.2015.01.001
Alexa B.R. McIntyre, Lindsay Rizzardi, Angela M Yu, Gail L. Rosen, Noah Alexander, Douglas J. Botkin, Kristen K. John, Sarah L. Castro-Wallace, Aaron S. Burton, Andrew Feinberg.... (2015) Nanopore Sequencing in Microgravity. bioRxiv. DOI: 10.1101/032342
by Aurametrix team in Environmental health
Our health depends on a multitude of environmental factors, day in and day out. And today is a special day - Friday the 13th. How should you feel on this day? Friday the 13th is one of the most feared dates, associated with bad luck in the West. And it is taken cautiously even in cultures that do not fear the 13th - for example, among Chinese mothers avoiding delivering their babies on the 13th. But science says that those born on the 13th and even those born on Friday the 13th are not in ........ Read more »
Smyth JM, Wonderlich SA, Sliwinski MJ, Crosby RD, Engel SG, Mitchell JE, & Calogero RM. (2009) Ecological momentary assessment of affect, stress, and binge-purge behaviors: day of week and time of day effects in the natural environment. The International journal of eating disorders, 42(5), 429-36. PMID: 19115371
Fidrmuc, J., & Tena, J. (2015) Friday the 13th: The Empirics of Bad Luck. Kyklos, 68(3), 317-334. DOI: 10.1111/kykl.12085
Lucey, B. (2002) Friday the 13th and the Philosophical Basis of Financial Economics. SSRN Electronic Journal. DOI: 10.2139/ssrn.962697
Chung, R., Darrat, A., & Li, B. (2014) Superstitions and stock trading: some new evidence. Journal of the Asia Pacific Economy, 19(4), 527-538. DOI: 10.1080/13547860.2014.920589
Stone, A., Schneider, S., & Harter, J. (2012) Day-of-week mood patterns in the United States: On the existence of ‘Blue Monday’, ‘Thank God it's Friday’ and weekend effects. The Journal of Positive Psychology, 7(4), 306-314. DOI: 10.1080/17439760.2012.691980
Schuld J, Slotta JE, Schuld S, Kollmar O, Schilling MK, & Richter S. (2011) Popular belief meets surgical reality: impact of lunar phases, Friday the 13th and zodiac signs on emergency operations and intraoperative blood loss. World journal of surgery, 35(9), 1945-9. PMID: 21713579
Almond D, Chee CP, Sviatschi MM, & Zhong N. (2015) Auspicious birth dates among Chinese in California. Economics and human biology, 153-9. PMID: 26160600
by Aurametrix team in Environmental health
"Anno bisesto, anno funesto” (leap year, gloomy year), say Italians. “Leap year was ne’er a good sheep year” agrees an old Scottish proverb. "Високосный год "Урожай" соберет" (leap year will gather the "Harvest") warns a Russian saying implying that there will be plenty of disasters - calamities, catastrophes and cataclysms. But usually there are not. Leap years tend to be good for stocks (with the exception of the recent crashes in 2000 and 2008), al........ Read more »
Neumann, P. (1992) Leap-year problems. Communications of the ACM, 35(6), 162. DOI: 10.1145/129888.129900
Cohen CF, & Bachofer HJ. (1980) Hospital indicators: leap year distorts February statistics. Hospitals, 54(11), 43-6. PMID: 7372291
by TakFurTheKaffe in Tak Fur The Kaffe
Sea level rose faster in the 20th century than in any other century of the last 3,000 years, new methods for estimating future sea level rise and heat waves, consumers to blame for their carbon footprint, and new virtual forests predict future impacts of climate change. Here are five of the latest scientific studies published open-access this week.... Read more »
Kopp, R., Kemp, A., Bittermann, K., Horton, B., Donnelly, J., Gehrels, W., Hay, C., Mitrovica, J., Morrow, E., & Rahmstorf, S. (2016) Temperature-driven global sea-level variability in the Common Era. Proceedings of the National Academy of Sciences, 201517056. DOI: 10.1073/pnas.1517056113
Mengel, M., Levermann, A., Frieler, K., Robinson, A., Marzeion, B., & Winkelmann, R. (2016) Future sea level rise constrained by observations and long-term commitment. Proceedings of the National Academy of Sciences, 201500515. DOI: 10.1073/pnas.1500515113
Leary, E., Young, L., DuClos, C., & Jordan, M. (2015) Identifying Heat Waves in Florida: Considerations of Missing Weather Data. PLOS ONE, 10(11). DOI: 10.1371/journal.pone.0143471
Ivanova, D., Stadler, K., Steen-Olsen, K., Wood, R., Vita, G., Tukker, A., & Hertwich, E. (2015) Environmental Impact Assessment of Household Consumption. Journal of Industrial Ecology. DOI: 10.1111/jiec.12371
Liénard, J., & Strigul, N. (2016) An individual-based forest model links canopy dynamics and shade tolerances along a soil moisture gradient. Royal Society Open Science, 3(2), 150589. DOI: 10.1098/rsos.150589
by TakFurTheKaffe in Tak Fur The Kaffe
Levels of the toxic compound PCBs in the marine environment are now so high that they threaten the very existence of some of Europe’s top sea predators, suggests new research. ... Read more »
Jepson, P., Deaville, R., Barber, J., Aguilar, �., Borrell, A., Murphy, S., Barry, J., Brownlow, A., Barnett, J., Berrow, S.... (2016) PCB pollution continues to impact populations of orcas and other dolphins in European waters. Scientific Reports, 18573. DOI: 10.1038/srep18573
by TakFurTheKaffe in Tak Fur The Kaffe
The world’s largest canyon discovered hidden under the Antarctic ice, citizen science is on the up, new genetic secrets of Ötzi Iceman, and the social lives of chimps. Here are 5 of the latest scientific studies published open-access this week.... Read more »
Jamieson, S., Ross, N., Greenbaum, J., Young, D., Aitken, A., Roberts, J., Blankenship, D., Bo, S., & Siegert, M. (2015) An extensive subglacial lake and canyon system in Princess Elizabeth Land, East Antarctica. Geology. DOI: 10.1130/G37220.1
Kullenberg, C., & Kasperowski, D. (2016) What Is Citizen Science? – A Scientometric Meta-Analysis. PLOS ONE, 11(1). DOI: 10.1371/journal.pone.0147152
Moeller, A., Foerster, S., Wilson, M., Pusey, A., Hahn, B., & Ochman, H. (2016) Social behavior shapes the chimpanzee pan-microbiome. Science Advances, 2(1). DOI: 10.1126/sciadv.1500997
Coia, V., Cipollini, G., Anagnostou, P., Maixner, F., Battaggia, C., Brisighelli, F., Gómez-Carballa, A., Destro Bisol, G., Salas, A., & Zink, A. (2016) Whole mitochondrial DNA sequencing in Alpine populations and the genetic history of the Neolithic Tyrolean Iceman. Scientific Reports, 18932. DOI: 10.1038/srep18932
Engelmann, J., & Herrmann, E. (2016) Chimpanzees Trust Their Friends. Current Biology. DOI: 10.1016/j.cub.2015.11.037
by naturallyspeakingpodcast in Naturally Speaking Podcast
Is there a better option to paving a highway through the middle of the Serengeti and disrupting the greatest land migration on Earth? The conflict between conservation and development is something we have touched on at Naturally Speaking before—here at the Institute our researchers understand that a fine balance between the two must be achieved. However, […]
... Read more »
Hopcraft, J., Bigurube, G., Lembeli, J., & Borner, M. (2015) Balancing Conservation with National Development: A Socio-Economic Case Study of the Alternatives to the Serengeti Road. PLOS ONE, 10(7). DOI: 10.1371/journal.pone.0130577
by Cath Jex in Tak Fur The Kaffe
There's simply not enough time in the week to write about everything that I'd like! So here are 6 extra short summaries of scientific studies published during the past week, available free via open-access journals for anyone and everyone to read and enjoy!... Read more »
Bergmann, M., Sandhop, N., Schewe, I., & D’Hert, D. (2015) Observations of floating anthropogenic litter in the Barents Sea and Fram Strait, Arctic. Polar Biology. DOI: 10.1007/s00300-015-1795-8
Padowski, J., Gorelick, S., Thompson, B., Rozelle, S., & Fendorf, S. (2015) Assessment of human–natural system characteristics influencing global freshwater supply vulnerability. Environmental Research Letters, 10(10), 104014. DOI: 10.1088/1748-9326/10/10/104014
Conrad, T., & Ayasse, M. (2015) The Role of Vibrations in Population Divergence in the Red Mason Bee, Osmia bicornis. Current Biology. DOI: 10.1016/j.cub.2015.08.059
Luo J, Ault JS, Shay LK, Hoolihan JP, Prince ED, Brown CA, & Rooker JR. (2015) Ocean Heat Content Reveals Secrets of Fish Migrations. PloS one, 10(10). PMID: 26484541
Yoon JH, Wang SY, Gillies RR, Kravitz B, Hipps L, & Rasch PJ. (2015) Increasing water cycle extremes in California and in relation to ENSO cycle under global warming. Nature communications, 8657. PMID: 26487088
Lively, J. (2015) A new species of baenid turtle from the Kaiparowits Formation (Upper Cretaceous, Campanian) of southern Utah. Journal of Vertebrate Paleontology. DOI: 10.1080/02724634.2015.1009084
by Rosin Cerate in Rosin Cerate
The human experience with leeches typically centers around the unpleasantness of being fed upon, with perhaps a dash of they make good fishing bait or we sometimes use them for medical purposes. Oh, and jokes about medieval doctors being mostly useless. Notably, most leeches don't feed on people, opting instead to harvest the fluids of birds, turtles, fishes, frogs, salamanders, snails, and/or insect larvae. They've definitely found a niche, and boy is it an annoying one.The truth is substantial........ Read more »
Tsuji LJ, & Martin ID. (2009) The use of leeches to monitor aquatic PCB contamination at Mid-Canada Radar Line site 050: Four years post-remediation. Environmental Monitoring and Assessment, 153(1-4), 1-7. PMID: 18478345
by Aurametrix team in Environmental health
Is that it? Summer is finally over. And so is the sweet melancholy of August, listening to nature sounds - soothing ocean waves or a chorus of crickets while sitting on a porch, sun drying you with warm rays... It's the end of the holiday break.Tomorrow is September, the second most stressful month of the year. It is known for stock market volatility and big financial crashes, strategic planning meetings, storms and tornadoes, hectic days at work, the season of "back to school" and the time for ........ Read more »
Levy, A. (2015) The Night Before the First Day of School. Journal of Clinical Oncology, 33(13), 1509-1510. DOI: 10.1200/JCO.2014.60.5790
Muehling, D., Sprott, D., & Sprott, D. (2004) THE POWER OF REFLECTION: An Empirical Examination of Nostalgia Advertising Effects. Journal of Advertising, 33(3), 25-35. DOI: 10.1080/00913367.2004.10639165
by TakFurTheKaffe in Tak Fur The Kaffe
A new study has shown that visiting aquariums and spending time watching fish has benefits for both physical and mental health.... Read more »
Cracknell, D., White, M., Pahl, S., Nichols, W., & Depledge, M. (2015) Marine Biota and Psychological Well-Being: A Preliminary Examination of Dose-Response Effects in an Aquarium Setting. Environment and Behavior. DOI: 10.1177/0013916515597512
by Betty Zou in Eat, Read, Science
An innovative way of cooking rice that removes more arsenic than the conventional method and a new strain of high-starch, low-methane rice are discussed.... Read more »
Carey M, Jiujin X, Gomes Farias J, & Meharg AA. (2015) Rethinking Rice Preparation for Highly Efficient Removal of Inorganic Arsenic Using Percolating Cooking Water. PloS one, 10(7). PMID: 26200355
Su J, Hu C, Yan X, Jin Y, Chen Z, Guan Q, Wang Y, Zhong D, Jansson C, Wang F.... (2015) Expression of barley SUSIBA2 transcription factor yields high-starch low-methane rice. Nature. PMID: 26200336
by Cath Jex in Tak Fur The Kaffe
The oceans may be headed into a new biological regime, where marine organisms take less carbon dioxide out of the atmosphere and reduce the ocean’s ability to mitigate the effects of global change.... Read more »
Kvale, K., Meissner, K., & Keller, D. (2015) Potential increasing dominance of heterotrophy in the global ocean. Environmental Research Letters, 10(7), 74009. DOI: 10.1088/1748-9326/10/7/074009
by GrrlScientist in Maniraptora
SUMMARY: Recent research suggests that the commonly prescribed psychiatric drug, Prozac, occurs at environmentally relevant concentrations that can significantly alter behaviour and physiology in wild birds .. Read more... Read more »
Bean, T., Boxall, A., Lane, J., Herborn, K., Pietravalle, S., & Arnold, K. (2014) Behavioural and physiological responses of birds to environmentally relevant concentrations of an antidepressant. Philosophical Transactions of the Royal Society B: Biological Sciences, 369(1656), 20130575-20130575. DOI: 10.1098/rstb.2013.0575
Crockett, M., Siegel, J., Kurth-Nelson, Z., Ousdal, O., Story, G., Frieband, C., Grosse-Rueskamp, J., Dayan, P., & Dolan, R. (2015) Dissociable Effects of Serotonin and Dopamine on the Valuation of Harm in Moral Decision Making. Current Biology, 25(14), 1852-1859. DOI: 10.1016/j.cub.2015.05.021
Markman, S., Müller, C., Pascoe, D., Dawson, A., & Buchanan, K. (2011) Pollutants affect development in nestling starlings Sturnus vulgaris. Journal of Applied Ecology, 48(2), 391-397. DOI: 10.1111/j.1365-2664.2010.01931.x
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